CDS

Accession Number TCMCG057C57987
gbkey CDS
Protein Id XP_018464222.1
Location 3788..5557
Gene LOC108835472
GeneID 108835472
Organism Raphanus sativus

Protein

Length 589aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018608720.1
Definition PREDICTED: probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Q
Description 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
KEGG_TC -
KEGG_Module M00372        [VIEW IN KEGG]
KEGG_Reaction R06952        [VIEW IN KEGG]
R06953        [VIEW IN KEGG]
R09682        [VIEW IN KEGG]
KEGG_rclass RC00912        [VIEW IN KEGG]
RC01690        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09840        [VIEW IN KEGG]
EC 1.13.11.51        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009687        [VIEW IN EMBL-EBI]
GO:0009688        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010162        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0010436        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016106        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022611        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043288        [VIEW IN EMBL-EBI]
GO:0043289        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045549        [VIEW IN EMBL-EBI]
GO:0046165        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902644        [VIEW IN EMBL-EBI]
GO:1902645        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCTTCTTACGTATTATCACCAAACACAGCCAAACTCAATCTCTCCTTTGCACCATACGATCTCGATGCTCCGTCACCTTCATCCTCCGTTAGTTACACCAACCCCAAGTCTAGACGCCGTAAATTCTCAACAAACTCCGTCACAGACTCTCCAGCTTTGTTAAATTTCCCAAATTACCCTTCTCCAAACCCCATAATTCCGAAGAAGGACACTTCTCACTGGAATCCTCTCCAACGCGCCGCCTCCGCCGCTTTCGACTTCGCCGAGGCCGCATTACTCTCTCGCGAGCGTTCTCAGCCTCTCCCCAAAACCGTTGATCCTCGCCATCAGATCTCCGGTAACTACGCTCCGGTGCCGGAACAATCCGTTAAATCATCGCTCTCCGTTACCGGAAATATCCCTGACTGCATTGACGGCGTTTATTTACGTAACGGCGCTAATCCACTCTTCGAGCCAGTCTCTGGCCATCACCTCTTCGACGGAGACGGCATGGTTCACGCCGTTAAAATTAATAACGGAGACGCGAGTTACTCGTGCCGGTTCACGGAAACCGAGAGATTGGTTCAGGAGAAACGTCTCGGTTCTCCGATTTTCCCTAAAGCCATCGGTGAGCTACACGGTCACTCGGGGATAGCACGGTTGATGCTGTTTTACGCGCGTGGCTTATTCGGTTTATTAAATCACAGTAACGGAACCGGAGTCGCTAACGCCGGTTTGGTTTATTTCCACGACCGGTTATTAGCAATGTCTGAAGACGATCTCCCTTACCAAGTTCGCGTCACCGACGACGGCGATCTCGAGACTGTCGGAAGATTCGACTTCGACGGACAGTTAAACTCCGCCATGATCGCTCACCCTAAAATCGATCCGGAGACGAAGGAGCTGTTCGCCTTGAGCTACGACGTCGTTAAGAAACCGTACCTGAAATACTTCAGATTCTCGCCGGAAGGGGTGAAGTCGCCGGACGTTGAGATTCCTCTCGCGAGTCCGACGATGATGCACGATTTCGCGATCACAGAGAATTTCGTCGTGATTCCCGACCAGCAAGTCGTGTTTAAGCTTTCCGACATGTTTCTTGGTAAATCTCCGGTTAAGTACGACGGAGAGAAAGTTTCCCGGTTTGGAATTTTGCCCAAAAACGCTGTTGATGCGTCGGAGATGATCTGGGTAGAGTCACCGGAGACTTTCTGTTTCCACCTGTGGAACGCTTGGGAGTCACCGGAGACCGACGAGGTTGTTGTGATCGGATCTTGTATGACTCCGGCGGACTCGATTTTCAACGAGTGTGATGAGCAGCTCAACAGTGTTTTGTCTGAAATCCGGTTAAATCTCAAAACCGGAAAATCCACGCGAAGAACTATAATTCCCGGTTCGGTTCAGATGAATCTTGAAGCAGGTATGGTAAACCGGAATCTTCTAGGGAGGAAAACCCGGTACGCGTACCTAGCCATAACCGAGCCGTGGCCTAAAGTATCCGGATTCGCTAAAGTGGATCTTTCCACTGGAGAAGTTAAAAATCATTTCTACGGAGGTAAAAAGTACGGAGGTGAACCTTTTTTCTTACCCAGAGGGTTAGAATCTGACAGAGAAGATGACGGTTACATTATGTCGTTTGTTCACGACGAGGAGAGCTGGAAATCGGAGCTTCAGATTGTTAACGCCGTTACGTTGGAACTGGAAGCAACCGTTAATTTGCCATCAAGAGTACCTTATGGTTTTCACGGCACGTTCGTCAATTCGGCTGATATAGTAAACCAGGCTTAA
Protein:  
MASSYVLSPNTAKLNLSFAPYDLDAPSPSSSVSYTNPKSRRRKFSTNSVTDSPALLNFPNYPSPNPIIPKKDTSHWNPLQRAASAAFDFAEAALLSRERSQPLPKTVDPRHQISGNYAPVPEQSVKSSLSVTGNIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKINNGDASYSCRFTETERLVQEKRLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHSNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDDGDLETVGRFDFDGQLNSAMIAHPKIDPETKELFALSYDVVKKPYLKYFRFSPEGVKSPDVEIPLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKSPVKYDGEKVSRFGILPKNAVDASEMIWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECDEQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAITEPWPKVSGFAKVDLSTGEVKNHFYGGKKYGGEPFFLPRGLESDREDDGYIMSFVHDEESWKSELQIVNAVTLELEATVNLPSRVPYGFHGTFVNSADIVNQA